Structure of PDB 8p2h Chain d

Receptor sequence
>8p2hd (length=204) Species: 93061 (Staphylococcus aureus subsp. aureus NCTC 8325) [Search protein sequence]
QKINPIGLRVGIIRDWEAKWYAEKDFASLLHEDLKIRKFIDNELKEASVS
HVEIERAANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINV
IEIKKVDLDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQV
SGRLGGADIARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIY
RGEV
3D structure
PDB8p2h Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric hybrid state
Chaind
Resolution2.49 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna d Q3 K4 I5 K26 R126 S153 G154 R155 D160 I161 A162 T171 P173 L174 H175 T176 L177 R178 H185 E187 T191 Y192 K194 G196 K198 Q1 K2 I3 K24 R124 S151 G152 R153 D158 I159 A160 T169 P171 L172 H173 T174 L175 R176 H183 E185 T189 Y190 K192 G194 K196
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8p2h, PDBe:8p2h, PDBj:8p2h
PDBsum8p2h
PubMed38902339
UniProtQ2FW12|RS3_STAA8 Small ribosomal subunit protein uS3 (Gene Name=rpsC)

[Back to BioLiP]