Structure of PDB 8olc Chain d

Receptor sequence

>8olcd (length=258) Species: 10912 (Rotavirus) [Search protein sequence]

LPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDTLSQLF
LTKGWPTGSVYFKEYTNIASFSVDPQLYCDYNVVLMKYDATLQLDMSELA
DLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIG
CLTTDATTFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGPRE
NVAVIQVGGSDILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVDQI
IQVMSKRS

3D structure

PDB

8olc Structural basis of rotavirus spike proteolytic activation

Chain

Resolution

3.48 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	d	G206 T214 E216	G150 T158 E160
BS02	CA	d	Q177 D228 V229 D231	Q121 D172 V173 D175

External links

PDB	RCSB:8olc, PDBe:8olc, PDBj:8olc
PDBsum	8olc
PubMed
UniProt	A0A060IEQ1

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