Structure of PDB 8k21 Chain d

Receptor sequence
>8k21d (length=295) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence]
MQKQILTSQKRNMYILSRCKVLVKNGQVCHLHEDGNVYTVPYANTVFIGL
AEGTSITNEAMSMLAANGVIVFWTKGGGYDMFAADIICHLPQADYRPTKY
MQNWVRLWLDEEKKLSAAKEILKMRVDSLSTHVHDFGVDVENKRVSSIVN
KFDKGVTQATSFESLLGHEGTFVKSLYKEYALEYEIEFKRDHKSADNYNK
FLTLGNYYAYGIARSSLWALGIDNSFPLLHGSTRRGGLVFDVADIIKTSI
ILPLAFHAADQGMSNTEFKRSCVAYFDKNDILAYLINNIKRLCME
3D structure
PDB8k21 Structure of csy complex with short DNA
Chaind
Resolution3.8 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna d L22 V23 N25 G26 T57 E59 L22 V23 N25 G26 T57 E59
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004519 endonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0051607 defense response to virus

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Molecular Function
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Biological Process
External links
PDB RCSB:8k21, PDBe:8k21, PDBj:8k21
PDBsum8k21
PubMed
UniProtF1D5W0

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