Structure of PDB 7k5i Chain d

Receptor sequence
>7k5id (length=54) Species: 9606 (Homo sapiens) [Search protein sequence]
HQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGF
IKLD
3D structure
PDB7k5i SARS-CoV-2 Nsp1 suppresses host but not viral translation through a bipartite mechanism.
Chaind
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna d H3 Y7 W8 H10 P11 R12 K13 F14 G17 R19 C24 N26 H28 L30 R32 R40 Q41 R44 K54 D56 H1 Y5 W6 H8 P9 R10 K11 F12 G15 R17 C22 N24 H26 L28 R30 R38 Q39 R42 K52 D54
BS02 ZN d C21 C24 C39 C42 C19 C22 C37 C40
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
GO:0005791 rough endoplasmic reticulum
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005925 focal adhesion
GO:0015935 small ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0070062 extracellular exosome
GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:7k5i, PDBe:7k5i, PDBj:7k5i
PDBsum7k5i
PubMed32995777
UniProtP62273|RS29_HUMAN Small ribosomal subunit protein uS14 (Gene Name=RPS29)

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