Structure of PDB 6om0 Chain d

Receptor sequence
>6om0d (length=103) Species: 9606 (Homo sapiens) [Search protein sequence]
TKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALR
KSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIR
SMP
3D structure
PDB6om0 Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule.
Chaind
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna d T7 K8 K9 S10 L11 E12 T1 K2 K3 S4 L5 E6
BS02 rna d L29 G30 Y31 K32 Q33 K36 P53 A54 R56 K57 Y88 Y89 R90 V91 C92 L23 G24 Y25 K26 Q27 K30 P47 A48 R50 K51 Y82 Y83 R84 V85 C86
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0031640 killing of cells of another organism
GO:0050829 defense response to Gram-negative bacterium
GO:0061844 antimicrobial humoral immune response mediated by antimicrobial peptide
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005925 focal adhesion
GO:0014069 postsynaptic density
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0045202 synapse
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6om0, PDBe:6om0, PDBj:6om0
PDBsum6om0
PubMed31160784
UniProtP62888|RL30_HUMAN Large ribosomal subunit protein eL30 (Gene Name=RPL30)

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