Structure of PDB 5mkn Chain d

Receptor sequence
>5mknd (length=72) Species: 2187 (Methanococcus vannielii) [Search protein sequence]
MMDTQRPLDALGKSINTNVTVYLKDGKLVKGRLKAYDLHMNVALENAKIE
SDEEKEFPMLVVRGDNVLYVSL
3D structure
PDB5mkn Crystal structure of SmAP (LSm) protein from Methanococcus vannielii in complex with URIDINE-5'-MONOPHOSPHATE
Chaind
Resolution2.55 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 U5P d H39 N41 R63 D65 H39 N41 R63 D65
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0046872 metal ion binding
Cellular Component
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:5mkn, PDBe:5mkn, PDBj:5mkn
PDBsum5mkn
PubMed
UniProtA6UPF5

[Back to BioLiP]