Structure of PDB 3j7r Chain d

Receptor sequence

>3j7rd (length=107) Species: 9823 (Sus scrofa) [Search protein sequence]

NEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTR
LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNL
QTVNVDE

3D structure

PDB

3j7r Structure of the Mammalian ribosome-sec61 complex to 3.4 a resolution.

Chain

Resolution

3.9 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	d	R23 Y25 T26 H30 K31 R32 H34 G35 F38 K39 R41 L46 K47 R50 R63 I64 T66 N69 K70 W73 K75 I77 R78 N79 Y82 R83 K115 N116 L117 Q118 T119 N121	R6 Y8 T9 H13 K14 R15 H17 G18 F21 K22 R24 L29 K30 R33 R46 I47 T49 N52 K53 W56 K58 I60 R61 N62 Y65 R66 K98 N99 L100 Q101 T102 N104

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0015934	large ribosomal subunit
GO:0022625	cytosolic large ribosomal subunit
GO:0098556	cytoplasmic side of rough endoplasmic reticulum membrane
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:3j7r, PDBe:3j7r, PDBj:3j7r
PDBsum	3j7r
PubMed	24930395
UniProt	P62901\|RL31_PIG Large ribosomal subunit protein eL31 (Gene Name=RPL31)