Structure of PDB 8ip9 Chain ca

Receptor sequence

>8ip9ca (length=178) Species: 4565 (Triticum aestivum) [Search protein sequence]

GISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRG
GNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNSSNNELVRTQTLVKNA
IVQVDAAPFKQWYLTHSNNVQRKLEKRQQGRTLDSHIEEQFSGGRLLACI
SSRPGQCGRADGYILEGKELEFYMRKLQ

3D structure

PDB

8ip9 Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.

Chain

Resolution

3.0 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	ca	G2 I3 R5 H9 K10 R11 T14 G16 K19 W21 K23 K24 R25 K26 Y27 L29 G30 R31 Q32 P33 K42 R45 R48 V49 R50 G51 G52 K55 R57 L59 N65 S67 T74 R75 K76 S87 V98 K99 N100 N156 N157 R160 R165 S189 S190 R191 G193 Q194 C195 R197 D199	G1 I2 R4 H8 K9 R10 T13 G15 K18 W20 K22 K23 R24 K25 Y26 L28 G29 R30 Q31 P32 K41 R44 R47 V48 R49 G50 G51 K54 R56 L58 N64 S66 T73 R74 K75 S86 V97 K98 N99 N118 N119 R122 R127 S151 S152 R153 G155 Q156 C157 R159 D161

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8ip9, PDBe:8ip9, PDBj:8ip9
PDBsum	8ip9
PubMed	38267667
UniProt	A0A3B6AYT7

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