Structure of PDB 8wif Chain c

Receptor sequence
>8wifc (length=228) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence]
MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYI
DKAYEFVKETVAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGM
LTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILMLTREKNKLERSLGG
IRDMQKVPSAVWVVDTNKEHIAVGEARKLGIPVIAILDTNCDPDVVDYPI
PGNDDAIRSAALLTKVIASAVAEGLQAR
3D structure
PDB8wif Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Chainc
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna c R21 W23 P25 R95 G98 G99 T102 N103 T106 R110 K132 M136 R139 I171 K178 R21 W23 P25 R95 G98 G99 T102 N103 T106 R110 K132 M136 R139 I171 K178
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8wif, PDBe:8wif, PDBj:8wif
PDBsum8wif
PubMed38245551
UniProtA0QVB8|RS2_MYCS2 Small ribosomal subunit protein uS2 (Gene Name=rpsB)

[Back to BioLiP]