Structure of PDB 8upr Chain c

Receptor sequence
>8uprc (length=77) Species: 562 (Escherichia coli) [Search protein sequence]
SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRV
SAKGMRVIDKKGIDTVLAELRARGEKY
3D structure
PDB8upr Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Chainc
Resolution5.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna c S2 R3 K10 R11 T14 G15 N16 R18 S19 A21 L22 N23 K26 R27 R28 F29 L30 P31 N32 H34 H36 R37 R45 R50 A53 K54 R57 K61 K62 S1 R2 K9 R10 T13 G14 N15 R17 S18 A20 L21 N22 K25 R26 R27 F28 L29 P30 N31 H33 H35 R36 R44 R49 A52 K53 R56 K60 K61
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8upr, PDBe:8upr, PDBj:8upr
PDBsum8upr
PubMed39117885
UniProtA0A1X3JA73

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