Structure of PDB 8tof Chain c

Receptor sequence
>8tofc (length=103) Species: 8355 (Xenopus laevis) [Search protein sequence]
TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILEL
AGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVL
LPK
3D structure
PDB8tof Structure of the complete Saccharomyces cerevisiae Rpd3S-nucleosome complex.
Chainc
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide c E61 D90 E92 E46 D75 E77
BS02 dna c R17 R20 R32 R77 R2 R5 R17 R62
BS03 dna c R29 R42 V43 G44 A45 K75 T76 R77 R14 R27 V28 G29 A30 K60 T61 R62
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8tof, PDBe:8tof, PDBj:8tof
PDBsum8tof
PubMed38065958
UniProtP06897|H2A1_XENLA Histone H2A type 1

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