Structure of PDB 8k24 Chain c

Receptor sequence

>8k24c (length=247) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence]

MRKFIIVKNVKVDGINAKSSDITVGMPPATTFCGLGETMSIKTGIVVKAV
SYGSVKFEVRGSRFNTSVTKFAWQDRGNGGKANNNSPIQPKPLADGVFTL
CFEVEWEDCAEVLVDKVTNFINTARIAGGTIASFNKPFVKVAKDAEELAS
VKNAMMPCYVVVDCGVEVNIFEDAVNRKLQPMVNGYKKLEKIVDNKHMRD
KFTPAYLATPTYTMIGYKMVSNVDNFDQALWQYGENTKVKTIGGIYN

3D structure

PDB

8k24 Structure of csy complex with long DNA State2

Chain

Resolution

3.72 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	c	N16 K18 S19 S20 T31 G34 E37 T38 I41 K42 T69 K70 F71 A72 Q74 K91 R125 G128 Y186 R199 P210	N16 K18 S19 S20 T31 G34 E37 T38 I41 K42 T69 K70 F71 A72 Q74 K91 R125 G128 Y186 R199 P210
BS02	dna	c	N85 P87 I88	N85 P87 I88
BS03	dna	c	R63 F64 N153 M156 Y159 K218 M219 N222	R63 F64 N153 M156 Y159 K218 M219 N222

External links

PDB	RCSB:8k24, PDBe:8k24, PDBj:8k24
PDBsum	8k24
PubMed
UniProt	F1D5V7

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