Structure of PDB 7y7b Chain c

Receptor sequence
>7y7bc (length=215) Species: 173977 (Chroomonas placoidea) [Search protein sequence]
KSAAIPFLEKPPMLDGSVPGDVGFDPLWVSSMLPDKGWYLFLQEAEIKHG
RVAMLAAAGAIVQDIFTFPGVTDTIGNVKMTSAHDKFLSMEGAGGKVATM
HQLLLWLGLLEVVSAFATIQMFGGTSSRMPGEFGFDPLGFGKSEAAMKTY
RLKEVKNGRLAMIGIGGMVHHYLLTGKGPLQFLGGIPNYKSCIEHPASGL
PYLMKAVGPVLPKIC
3D structure
PDB7y7b Structural basis and evolution of the photosystem I-light-harvesting supercomplex of cryptophyte algae.
Chainc
Resolution2.66 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CLA c Y244 A248 V252 Y202 A206 V210
BS02 II0 c Y244 K247 Y202 K205
BS03 CLA c A45 A46 I47 P48 F49 F66 A3 A4 I5 P6 F7 F24
BS04 CLA c G62 D63 V64 F66 V71 L84 Q85 A87 E88 H91 R201 M204 G20 D21 V22 F24 V29 L42 Q43 A45 E46 H49 R159 M162
BS05 CLA c M74 F83 H91 M32 F41 H49
BS06 CLA c L97 A98 G101 Q105 F110 V113 F129 T141 L55 A56 G59 Q63 F68 V71 F87 T99
BS07 CLA c A140 T141 Q144 W148 A98 T99 Q102 W106
BS08 CLA c H126 L130 M142 H143 L145 L146 L147 H84 L88 M100 H101 L103 L104 L105
BS09 CLA c F83 A87 K90 H91 L146 E153 T160 I161 F164 F41 A45 K48 H49 L104 E111 T118 I119 F122
BS10 CLA c R93 M96 L97 G173 E174 F175 F177 D178 F182 Y192 R193 E196 N199 R51 M54 L55 G131 E132 F133 F135 D136 F140 Y150 R151 E154 N157
BS11 CLA c L194 K195 K198 N199 L202 L152 K153 K156 N157 L160
BS12 KC2 c K195 N199 L202 K153 N157 L160
BS13 KC2 c G209 H212 H213 L216 F224 I228 N230 Y231 G167 H170 H171 L174 F182 I186 N188 Y189
BS14 CLA c H212 L215 L216 M246 L253 H170 L173 L174 M204 L211
BS15 CLA c F110 P111 G112 V113 T116 F68 P69 G70 V71 T74
BS16 CLA c H143 L147 H101 L105
BS17 KC2 c Y231 K232 Y189 K190
BS18 II0 c M96 F177 D178 P179 L180 L202 A203 G206 M210 H213 P221 M54 F135 D136 P137 L138 L160 A161 G164 M168 H171 P179
BS19 II0 c F66 D67 P68 V94 A98 Q105 M122 M204 I207 F24 D25 P26 V52 A56 Q63 M80 M162 I165
BS20 II0 c R201 L202 I205 L253 R159 L160 I163 L211
BS21 II0 c R93 V94 L145 L149 R51 V52 L103 L107
BS22 IHT c T123 H126 D127 I205 G208 V211 S240 T81 H84 D85 I163 G166 V169 S198
BS23 CLA c F175 G176 F133 G134
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Mon Dec 2 02:27:48 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7y7b', asym_id = 'c', title = 'Structural basis and evolution of the photosyste...ght-harvesting supercomplex of cryptophyte algae.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7y7b', asym_id='c', title='Structural basis and evolution of the photosyste...ght-harvesting supercomplex of cryptophyte algae.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0009765,0016020', uniprot = '', pdbid = '7y7b', asym_id = 'c'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009765,0016020', uniprot='', pdbid='7y7b', asym_id='c')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>