Structure of PDB 7ums Chain c

Receptor sequence
>7umsc (length=260) Species: 10912 (Rotavirus) [Search protein sequence]
LNIPITGSMDTVYSNSTREEVFLTSTLCLYYPTEASTQISDGEWKDSLSQ
MFLIKGWPTGSVYFKEYSNIVDFSVDPQLYCDYNLVLMKYDQSLELDMSE
LADLILNEWLCNPMDITLYYYQQSGESNKWISMGSSCTVKVCPLNTQTLG
IGCQTTNVDSFETVAENEKLAIVDVVDGINHKINLTTTTCTIRNCKKLGP
RENVAVIQVGGANILDITADPTTNPQIERMMRVNWKRWWQVFYTIVDYIN
QIVQVMSKRS
3D structure
PDB7ums Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion.
Chainc
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA c Q177 D228 D231 Q123 D174 D177
BS02 CA c G206 S214 E216 G152 S160 E162
BS03 CA c D151 E154 E222 L224 D97 E100 E168 L170
BS04 CA c D270 T272 D274 T277 D216 T218 D220 T223
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Cellular Component
GO:0016020 membrane
GO:0019028 viral capsid
GO:0039621 T=13 icosahedral viral capsid
GO:0039624 viral outer capsid
GO:0044165 host cell endoplasmic reticulum
GO:0044166 host cell endoplasmic reticulum lumen

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Molecular Function
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Cellular Component
External links
PDB RCSB:7ums, PDBe:7ums, PDBj:7ums
PDBsum7ums
PubMed35924923
UniProtB1NP55

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