Structure of PDB 7syi Chain c

Receptor sequence
>7syic (length=83) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQ
TVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH
3D structure
PDB7syi Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.
Chainc
Resolution4.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna c R17 H19 K20 K21 K22 Q26 P28 S30 F32 H49 Q51 P66 G68 G69 K70 R16 H18 K19 K20 K21 Q25 P27 S29 F31 H48 Q50 P65 G67 G68 K69
BS02 rna c D34 K36 Y41 I43 R80 D33 K35 Y40 I42 R79
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0046872 metal ion binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7syi, PDBe:7syi, PDBj:7syi
PDBsum7syi
PubMed35822879
UniProtG1TZ76|RS27_RABIT Small ribosomal subunit protein eS27 (Gene Name=RPS27)

[Back to BioLiP]