Structure of PDB 7m5d Chain c
Receptor sequence
>7m5dc (length=52) Species:
562
(Escherichia coli) [
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GIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAK
IK
3D structure
PDB
7m5d
Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
Chain
c
Resolution
2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
c
G4 I5 R6 K8 F20 Y21 T23 N26 K30 L34 L36 K37 F39 R44 H46
G1 I2 R3 K5 F17 Y18 T20 N23 K27 L31 L33 K34 F36 R41 H43
Gene Ontology
Molecular Function
GO:0000049
tRNA binding
GO:0003735
structural constituent of ribosome
Biological Process
GO:0000027
ribosomal large subunit assembly
GO:0002181
cytoplasmic translation
GO:0006412
translation
GO:0046677
response to antibiotic
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7m5d
,
PDBe:7m5d
,
PDBj:7m5d
PDBsum
7m5d
PubMed
UniProt
P0A7N9
|RL33_ECOLI Large ribosomal subunit protein bL33 (Gene Name=rpmG)
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