Structure of PDB 6wq2 Chain c

Receptor sequence
>6wq2c (length=202) Species: 176106 (Sulfolobus islandicus filamentous virus) [Search protein sequence]
GRQSHKKIDVRNDTSTRYKGKLYGIFVNYMGEKYAQQLVENMYSNYNDVF
VEIYNKMHNALRPTLVKLAGAGATFPLWQLVNEAIYAVYLTHKETASFLV
TKYVARGVPAMTVKTLLAEVGNQLKELVPAVAEQIGSVTLDHTNVVSTVD
NIVTSMPALPNSYAGVLMKTKVPTVTPHYAGTGTFSSMESAYKALEDIER
GL
3D structure
PDB6wq2 Structures of filamentous viruses infecting hyperthermophilic archaea explain DNA stabilization in extreme environments.
Chainc
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna c I10 D11 V12 R13 T16 R19 Y20 Y48 H60 R64 G74 F77 W80 N163 Y181 I8 D9 V10 R11 T14 R17 Y18 Y46 H58 R62 G72 F75 W78 N161 Y179
BS02 dna c Y20 K23 M44 N47 Y48 Y56 F77 Q81 N84 E85 Y88 T186 Y18 K21 M42 N45 Y46 Y54 F75 Q79 N82 E83 Y86 T184
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6wq2, PDBe:6wq2, PDBj:6wq2
PDBsum6wq2
PubMed32759221
UniProtQ914J4|CAPS1_SIFVH Major capsid protein 1 (Gene Name=SIFV0036)

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