Structure of PDB 6hrm Chain c

Receptor sequence
>6hrmc (length=52) Species: 562 (Escherichia coli) [Search protein sequence]
GIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAK
IK
3D structure
PDB6hrm Controlling orthogonal ribosome subunit interactions enables evolution of new function.
Chainc
Resolution2.96 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna c I5 R6 K8 F20 Y21 T23 K30 L34 L36 K37 F39 R44 H46 K55 I2 R3 K5 F17 Y18 T20 K27 L31 L33 K34 F36 R41 H43 K52
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0046677 response to antibiotic
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:6hrm, PDBe:6hrm, PDBj:6hrm
PDBsum6hrm
PubMed30518861
UniProtP0A7N9|RL33_ECOLI Large ribosomal subunit protein bL33 (Gene Name=rpmG)

[Back to BioLiP]