Structure of PDB 6ftg Chain c

Receptor sequence

>6ftgc (length=94) Species: 9986 (Oryctolagus cuniculus)

SINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEY
YAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIR

3D structure

• PDB: 6ftg Structural basis for coupling protein transport and N-glycosylation at the mammalian endoplasmic reticulum.
• Chain: c
• Resolution: 9.1 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	c	L29 G30 Y31 K32 Q33 K36 P53 A54 R56 S58 Y88 Y89 R90 V91 C92	L17 G18 Y19 K20 Q21 K24 P41 A42 R44 S46 Y76 Y77 R78 V79 C80

Gene Ontology

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UnboundLocalError

Python 3.6.8: /usr/bin/python3 Sat May 10 22:13:36 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1471                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)

   1472         else:

=> 1473             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)

   1474     

   1475     uniprot_line=''

pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6ftg', asym_id = 'c', title = 'Structural basis for coupling protein transport ...osylation at the mammalian endoplasmic reticulum.'

 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6ftg', asym_id='c', title='Structural basis for coupling protein transport ...osylation at the mammalian endoplasmic reticulum.')

    840 

    841     if go:

=>  842         display_go(go,uniprot,pdbid,asym_id)

    843     return pubmed,uniprot

    844 

global display_go = <function display_go>, go = '0003723', uniprot = '', pdbid = '6ftg', asym_id = 'c'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003723', uniprot='', pdbid='6ftg', asym_id='c')

    481         '''.replace("$namespace_link",namespace_link

    482           ).replace("$namespace",namespace

=>  483           ).replace("$uniprot",u

    484         ))

    485         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>