Structure of PDB 3jb9 Chain c

Receptor sequence
>3jb9c (length=300) Species: 284812 (Schizosaccharomyces pombe 972h-) [Search protein sequence]
PTIDEMVQEEKLLNKQRKYGQNYEYAKQIAKDKTYSNNLDYLDENAGKLS
NRMKRGDVSLAQISSGGDLKKINHVLDTCPLCLNYETQPLAPVISLSHRA
YVSLPTQPELAKYHCLIVPTGHRINTLSCDEDEWDEIRNFMKCIALMFDS
MNLGVIFYENAPSPQRYMHTAIECIPVSKRILSLAPAYFREALSTSDEEW
SQHRKIIDTLEGSKKYGKWAFRKMMVKELGYFHVWFSIDGGYGHVVEDEK
AWGRHDQVPRQVFASMLNLPPEVIRRKGSWTGKKDPREDMFRSRFEKFDW
3D structure
PDB3jb9 Structure of a yeast spliceosome at 3.6-angstrom resolution
Chainc
Resolution3.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna c K351 Y352 Y356 K360 K364 D401 K404 K18 Y19 Y23 K27 K31 D68 K71
BS02 ZN c C415 H455 H502 C82 H122 H169
Gene Ontology
Molecular Function
GO:0003674 molecular_function
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0008380 RNA splicing
GO:0045292 mRNA cis splicing, via spliceosome
Cellular Component
GO:0000974 Prp19 complex
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005684 U2-type spliceosomal complex
GO:0071014 post-mRNA release spliceosomal complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3jb9, PDBe:3jb9, PDBj:3jb9
PDBsum3jb9
PubMed26292707
UniProtQ09909|CWF19_SCHPO Pre-mRNA-splicing factor cwf19 (Gene Name=cwf19)

[Back to BioLiP]