Structure of PDB 5y6p Chain bW

Receptor sequence
>5y6pbW (length=228) Species: 35689 (Griffithsia pacifica) [Search protein sequence]
SIPVLNYSLSTQNQRVYSFEYLPNEEQPKCYTTDNLPAAIEMDQIIWAAY
RQIFSEHQLLSSTRQPFLESQLRFNQITVKDFIKGLILSDAFRYLNYDVN
NNYRFVEMCIQRILGREIYNHREKLAFAVIIGSQGLEAFIDLLINSEEYE
DNFGDNMIPYQRRRIIAQRSKGEIPFNLKTPRLGKDFLYKQGMPQLLWAG
PVHRFRPQEQSPKAGDPALFLSMVQDLD
3D structure
PDB5y6p Structure of phycobilisome from the red alga Griffithsia pacifica
ChainbW
Resolution3.5 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PEB bW N103 Y104 L126 A127 A129 V130 N102 Y103 L125 A126 A128 V129
BS02 PEB bW T12 N14 R16 V17 I167 R170 T11 N13 R15 V16 I166 R169
BS03 PEB bW S56 H58 R183 S55 H57 R182
BS04 PEB bW S71 F75 S70 F74
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 08:00:53 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5y6p', asym_id = 'bW', title = 'Structure of phycobilisome from the red alga Griffithsia pacifica'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5y6p', asym_id='bW', title='Structure of phycobilisome from the red alga Griffithsia pacifica')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0015979,0030089', uniprot = '', pdbid = '5y6p', asym_id = 'bW'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0015979,0030089', uniprot='', pdbid='5y6p', asym_id='bW')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>