Structure of PDB 6kgx Chain bA

Receptor sequence
>6kgxbA (length=380) Species: 35688 (Porphyridium purpureum) [Search protein sequence]
KVVDRLDSQPSAAFEQTKQVYTFSRYILGPHRAVVAPVAMDPSEKEVVLR
AVYRQVFGNAYIMEEERAELRVMESQFLLGELSVKELVRALAKSSTYKVR
FFEGAVQYRFIELCFKHLLGRAPDNHEEIAVHMRKYQQEGYDAEIDSYLD
AGEYDNVFGDDTVPFLRFRGVYTPCDSFNRQCALQGGWANSDKAMGGAAL
SGYNGSDGRQMSTMIGNYISGKPIPYEKVAADTPLKSTAPNWYARPNPAL
APQPAYVSAKEIAELRSRVSKLEAAWSVAVKQSAAAKDTVETWRAAAKEM
AAMRGISPMGEAYFGGIAQKVDNGALAQLGNKASSYKKYLYAIETDEVSR
LEVDLEEAKGQLRVLEAAMAKSTPMTRTAE
3D structure
PDB6kgx Structural basis of energy transfer in Porphyridium purpureum phycobilisome.
ChainbA
Resolution2.8 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PEB bA R54 G199 V200 Y201 C204 W271 R25 G170 V171 Y172 C175 W242
BS02 PEB bA Y90 S220 K222 Y61 S191 K193
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Nov 25 02:43:11 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6kgx', asym_id = 'bA', title = 'Structural basis of energy transfer in Porphyridium purpureum phycobilisome.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6kgx', asym_id='bA', title='Structural basis of energy transfer in Porphyridium purpureum phycobilisome.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0015979,0030089', uniprot = '', pdbid = '6kgx', asym_id = 'bA'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0015979,0030089', uniprot='', pdbid='6kgx', asym_id='bA')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>