Structure of PDB 8wmw Chain b

Receptor sequence

>8wmwb (length=194) Species: 52970 (Rhodomonas salina)

AKSKAVPFLSQPEALDGSMAGDVGFDPFGISSVIDIKWLRESELKHGRIC
MLAATGCLVQEVVHLPGPAFSQKMALNAWAAAPRGGMISILVAIGLIEMI
SNRFALTATDMFANPNRVPGDLGFDPLSLGANPANRARFELSEVIHGRAA
MMGFSGMVHQMIVSKQAPIEQLMHFKAVDSSLMKLGGAAGNLGY

3D structure

• PDB: 8wmw Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
• Chain: b
• Resolution: 3.3 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CLA	b	A217 G218	A189 G190
BS02	CLA	b	G214 A216	G186 A188
BS03	CLA	b	W107 R112 M115	W79 R84 M87
BS04	CLA	b	K32 A33 P35 F36 V51 F53	K4 A5 P7 F8 V23 F25
BS05	CLA	b	L43 G49 D50 V51 F53 D54 I58 S59 L67 R68 S70 E71 R176 M179	L15 G21 D22 V23 F25 D26 I30 S31 L39 R40 S42 E43 R148 M151
BS06	CLA	b	I62 W66 H74	I34 W38 H46
BS07	CLA	b	L80 A81 G84 V87 Q88 L93 F98 M115	L52 A53 G56 V59 Q60 L65 F70 M87
BS08	CLA	b	P111 G114 S117 I118	P83 G86 S89 I90
BS09	CLA	b	W66 E69 S70 K73 H74 I77 I122 E126 L134	W38 E41 S42 K45 H46 I49 I94 E98 L106
BS10	CLA	b	R76 G148 D149 L150 F152 D153 L157 G158 R164 F167 E168 E171	R48 G120 D121 L122 F124 D125 L129 G130 R136 F139 E140 E143
BS11	CLA	b	L169 S170 I173 H174	L141 S142 I145 H146
BS12	CLA	b	R166 F167 S170 H174	R138 F139 S142 H146
BS13	CLA	b	M180 S183 G184 Q188 V191 Q199 V206	M152 S155 G156 Q160 V163 Q171 V178
BS14	CLA	b	H187 I190 M211	H159 I162 M183
BS15	II0	b	M79 F152 D153 P154 L155 H174 Q188	M51 F124 D125 P126 L127 H146 Q160
BS16	II0	b	F53 D54 P55 F56 H74 I77 C78 W107 M179 F182	F25 D26 P27 F28 H46 I49 C50 W79 M151 F154
BS17	IHT	b	I173 R176 A177 S208 M211 L213	I145 R148 A149 S180 M183 L185
BS18	IHT	b	L104 W107 S183 H187	L76 W79 S155 H159
BS19	II0	b	K73 F98 I118 I122 E126	K45 F70 I90 I94 E98

External links

• PDB: RCSB:8wmw, PDBe:8wmw, PDBj:8wmw
• PDBsum: 8wmw
• PubMed: 38734819