Structure of PDB 8wmv Chain b

Receptor sequence

>8wmvb (length=194) Species: 52970 (Rhodomonas salina)

AKSKAVPFLSQPEALDGSMAGDVGFDPFGISSVIDIKWLRESELKHGRIC
MLAATGCLVQEVVHLPGPAFSQKMALNAWAAAPRGGMISILVAIGLIEMI
SNRFALTATDMFANPNRVPGDLGFDPLSLGANPANRARFELSEVIHGRAA
MMGFSGMVHQMIVSKQAPIEQLMHFKAVDSSLMKLGGAAGNLGY

3D structure

• PDB: 8wmv Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
• Chain: b
• Resolution: 2.94 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CLA	b	G214 A216	G186 A188
BS02	CLA	b	W107 R112	W79 R84
BS03	IHT	b	L104 W107 S183	L76 W79 S155
BS04	CLA	b	K32 A33 P35 V51 F53	K4 A5 P7 V23 F25
BS05	CLA	b	L43 G49 D50 V51 F53 D54 I58 L67 R68 E71 H74 R176 M179	L15 G21 D22 V23 F25 D26 I30 L39 R40 E43 H46 R148 M151
BS06	CLA	b	I62 W66 H74	I34 W38 H46
BS07	CLA	b	L80 A81 G84 Q88 H92 L93 F98 M115 F152	L52 A53 G56 Q60 H64 L65 F70 M87 F124
BS08	CLA	b	P111 G114 S117 I118	P83 G86 S89 I90
BS09	CLA	b	W66 E69 S70 K73 H74 I77 I122 E126	W38 E41 S42 K45 H46 I49 I94 E98
BS10	CLA	b	R76 M79 G148 D149 L150 F152 D153 G158 F167 E168 E171	R48 M51 G120 D121 L122 F124 D125 G130 F139 E140 E143
BS11	CLA	b	L169 I173 H174	L141 I145 H146
BS12	CLA	b	F167 S170 H174	F139 S142 H146
BS13	CLA	b	G184 H187 Q188 V191 Q199	G156 H159 Q160 V163 Q171
BS14	CLA	b	H187 I190 L213	H159 I162 L185
BS15	II0	b	M79 T83 F152 D153 P154 G181 G184 Q188	M51 T55 F124 D125 P126 G153 G156 Q160
BS16	II0	b	F53 D54 P55 F56 H74 C78 A81 Q88 A103 M179 F182	F25 D26 P27 F28 H46 C50 A53 Q60 A75 M151 F154
BS17	IHT	b	I173 R176 M180 V191 V206 L210 M211	I145 R148 M152 V163 V178 L182 M183
BS18	II0	b	K73 P94 F98 I118 I122 E126	K45 P66 F70 I90 I94 E98

External links

• PDB: RCSB:8wmv, PDBe:8wmv, PDBj:8wmv
• PDBsum: 8wmv
• PubMed: 38734819