Structure of PDB 8uk2 Chain b

Receptor sequence
>8uk2b (length=272) Species: 444185 (Simian rotavirus A strain RRV) [Search protein sequence]
INLPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDTLSQ
LFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDATLQLDMSE
LADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLG
IGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGP
RENVAVIQVGGSDVLDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVN
QIIQAMSKRSRSLNSAAFYYRI
3D structure
PDB8uk2 The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2+
Chainb
Resolution8.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA b D151 E154 E222 L224 D97 E100 E168 L170
BS02 CA b Q177 D228 V229 D231 Q123 D174 V175 D177
BS03 CA b G206 T214 E216 G152 T160 E162
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:8uk2, PDBe:8uk2, PDBj:8uk2
PDBsum8uk2
PubMed38574119
UniProtP12476|VP7_ROTRH Outer capsid glycoprotein VP7

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