Structure of PDB 8t5d Chain b

Receptor sequence

>8t5db (length=206) Species: 562 (Escherichia coli) [Search protein sequence]

GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS
VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI
NIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKV
EVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW
IFKGEI

3D structure

PDB

8t5d How Dedicated Ribosomes Translate a Leaderless mRNA.

Chain

Resolution

3.2 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	b	G1 Q2 K3 V4 R126 S153 R155 E160 I161 A162 W166 R168 R171 V172 P173 L174 H175 T176 L177 R178 E187 H189 T191 Y192 G193 V194	G1 Q2 K3 V4 R126 S153 R155 E160 I161 A162 W166 R168 R171 V172 P173 L174 H175 T176 L177 R178 E187 H189 T191 Y192 G193 V194
BS02	rna	b	A159 R163	A159 R163

External links

PDB	RCSB:8t5d, PDBe:8t5d, PDBj:8t5d
PDBsum	8t5d
PubMed	38185325

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