Structure of PDB 8pj5 Chain b

Receptor sequence

>8pj5b (length=131) Species: 9606 (Homo sapiens) [Search protein sequence]

FTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAK
KEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH
YLGEFSITYKPVKHGRPGIGATHSSRFIPLK

3D structure

PDB

8pj5 Structural basis for translational control by the human 48S initiation complex from codon scanning toward subunit joining

Chain

Resolution

2.9 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	b	P143 K145	P129 K131
BS02	rna	b	R18 S38 A39 R40 R42 R43 R44 R47 R50 R51 R59 K77 H79 R81 D82 Y97 G99 K100 F102 Y115 G117 E118 T122 Y123 V126 K127 H128 G129 R130 P131 I133 G134 A135 H137 K145	R4 S24 A25 R26 R28 R29 R30 R33 R36 R37 R45 K63 H65 R67 D68 Y83 G85 K86 F88 Y101 G103 E104 T108 Y109 V112 K113 H114 G115 R116 P117 I119 G120 A121 H123 K131
BS03	rna	b	T136 S138 R140 I142	T122 S124 R126 I128

External links

PDB	RCSB:8pj5, PDBe:8pj5, PDBj:8pj5
PDBsum	8pj5
PubMed
UniProt	P62841\|RS15_HUMAN Small ribosomal subunit protein uS19 (Gene Name=RPS15)