Structure of PDB 6ppf Chain b
Receptor sequence
>6ppfb (length=54) Species:
1423
(Bacillus subtilis) [
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AVPFRRTSKMKKRLRRTHFKLNVPGMTECPSCGEMKLSHRVCKACGSYNG
KDIN
3D structure
PDB
6ppf
Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate.
Chain
b
Resolution
3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
b
A2 V3 P4 F5 R6 R7 T8 S9 M11 K12 K13 L15 R16 R17 T18 H19 S39 H40 R41 Y49 N50
A1 V2 P3 F4 R5 R6 T7 S8 M10 K11 K12 L14 R15 R16 T17 H18 S38 H39 R40 Y48 N49
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:0015934
large ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6ppf
,
PDBe:6ppf
,
PDBj:6ppf
PDBsum
6ppf
PubMed
31665744
UniProt
O34687
|RL32_BACSU Large ribosomal subunit protein bL32 (Gene Name=rpmF)
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