Structure of PDB 5y6p Chain a8

Receptor sequence
>5y6pa8 (length=362) Species: 35689 (Griffithsia pacifica) [Search protein sequence]
AIEFQTYSGGLDRVSLEPYSITRYLFKPAPATVTDGDKDVAINAGLRQLF
GNAYIMEEERAEFYNAESKFRCGEITAREFARAVALSNAYRSRFFNTVSQ
YRFFELNFKHFLGRAPLNQVEYSKHFKIFAEGGYEAEINSYFDDPEYDEV
FGDDCMPFTRFRGTYAPINQFNRMCVLEGGFAMSDKQRPVQLMTSLAANV
PPAAYRVVDGLPAIPNAEHPTRKFELPNASLERFRNEVEVAKARELQLRV
ELKEAYAKRDEYRSGFAGFRAMAADMDISMLPGPRFQGRVENYPTWDGKS
APWGKSGVDTLSGVEKRPAKEIAKKEFQLERIKQLVVDLERRVAVLEAER
EQPALTPEPLMF
3D structure
PDB5y6p Structure of phycobilisome from the red alga Griffithsia pacifica
Chaina8
Resolution3.5 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PEB a8 A94 Y95 A223 S225 K227 A53 Y54 A182 S184 K186
BS02 PEB a8 Q141 Y142 S164 F167 Q100 Y101 S123 F126
BS03 PEB a8 N106 S109 C113 N65 S68 C72
BS04 PEB a8 T63 R64 T205 Y206 T22 R23 T164 Y165
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Thu Nov 28 14:37:16 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5y6p', asym_id = 'a8', title = 'Structure of phycobilisome from the red alga Griffithsia pacifica'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5y6p', asym_id='a8', title='Structure of phycobilisome from the red alga Griffithsia pacifica')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0015979,0030089', uniprot = '', pdbid = '5y6p', asym_id = 'a8'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0015979,0030089', uniprot='', pdbid='5y6p', asym_id='a8')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>