Structure of PDB 8wmj Chain a

Receptor sequence

>8wmja (length=175) Species: 52970 (Rhodomonas salina) [Search protein sequence]

EMSEAIPFMPKPANIDSSMPGYAGFDPLGFTDYYSAKWMQEAEIKHGRVC
MLAALGMVFPEFAKFPQFASFSTNPLEAFYQVSPAGWGQIFLFIGVLETF
SYEKSFYNFEGGAPGALGFDPLRMSSNPASAKQYAAAEVRNGRLAMIGFS
GMLHHAIVSKQGPITQIVEQNFYPK

3D structure

PDB

8wmj Growth phase-dependent reorganization of cryptophyte photosystem I antennae.

Chain

Resolution

3.0 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CLA	a	F213 Y214	F172 Y173
BS02	CLA	a	E45 A46 I47 P48 F49 A64 F66	E4 A5 I6 P7 F8 A23 F25
BS03	CLA	a	I56 M60 Y63 A64 F66 D67 F71 T72 M80 Q81 E84 R184 M187	I15 M19 Y22 A23 F25 D26 F30 T31 M39 Q40 E43 R143 M146
BS04	CLA	a	Y75 W79 M80 H87	Y34 W38 M39 H46
BS05	CLA	a	L93 A94 G97 F100 K105 F106 F109 F112 A119 V123	L52 A53 G56 F59 K64 F65 F68 F71 A78 V82
BS06	CLA	a	F109 S124 G127 Q130 I131 F134	F68 S83 G86 Q89 I90 F93
BS07	CLA	a	W79 E82 A83 K86 H87 F132 I135 E139 S146 F147	W38 E41 A42 K45 H46 F91 I94 E98 S105 F106
BS08	CLA	a	R89 M92 G156 A157 L158 F160 D161 M165 S166 Y175 E179 N182	R48 M51 G115 A116 L117 F119 D120 M124 S125 Y134 E138 N141
BS09	CLA	a	Q174 A177 A178 R181 N182	Q133 A136 A137 R140 N141
BS10	CLA	a	Y175 N182 L185	Y134 N141 L144
BS11	CLA	a	I188 S191 G192 H195 H196 V199 Q207 F213 P215	I147 S150 G151 H154 H155 V158 Q166 F172 P174
BS12	CLA	a	H195 I198	H154 I157
BS13	II0	a	M92 D161 P162 L163 N182 L185 A186 G189 M193 H196 I208	M51 D120 P121 L122 N141 L144 A145 G148 M152 H155 I167
BS14	II0	a	F66 D67 P68 L69 F71 H87 V90 C91 A94 P116 M187 F190	F25 D26 P27 L28 F30 H46 V49 C50 A53 P75 M146 F149
BS15	II0	a	R181 R184 L185 I188	R140 R143 L144 I147
BS16	IHT	a	F66 L117 F120 Y121 F190 S191 L194	F25 L76 F79 Y80 F149 S150 L153
BS17	II0	a	Q108 I135 E139	Q67 I94 E98
BS18	CLA	a	G136 T140 Y143	G95 T99 Y102

External links

PDB	RCSB:8wmj, PDBe:8wmj, PDBj:8wmj
PDBsum	8wmj
PubMed	38734819

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