Structure of PDB 7etj Chain a

Receptor sequence
>7etja (length=1275) Species: 10359 (Human betaherpesvirus 5) [Search protein sequence]
GTFCNRLEWVYFLTSGLAAAAHAIKFHDLNKLTTGKMLFHVQVPRVASGA
GLPTSRQTTIMVTKYSEKSPITIPFELSAACLTVLRALKNTADAMERGLI
HSFLQTLLRKAPPYFVVQTLVENATLARQALNRIQRSNILQSFKAKMLAT
LFLLNRTRDRDYVLKFLTRLAEAATDSILDNPTTYTTSSGAKISGVMVST
ANVMQIIMSLLSSHITKETVSAPATYGNFVLSPENAVTAISYHSILADFN
SYKAHLTSGQPHLPNDSLSQAGAHSLTPLSMDVIRLGEKTVIMENLRRVY
KNTDTKDPLERNVDLTFFFPVGLYLPEDRGYTTVESKVKLNDTVRNALPT
TAYLLNRDRAVQKIDFVDALKTLCHPVLHEPAPCLQTFTERGPPSEPAMQ
RLLECRFQQEPMGGAARRIPHFYRVRREVPRTVNEMKQDFVVTDFYKVGN
ITLYTELHPFFDFTHCQENSETVALCTPRIVIGNLPDGLAPGPFHELRTW
EIMEHMRLRPPPDYEETLRLFKTTVTSPNYPELCYLVDVLVHGNVDAFLL
IRTFVARCIVNMFHTRQLLVFAHSYALVTLIAEHLADGALPPQLLFHYRN
LVAVLRLVTRISALPGLNNGQLAEEPLSAYVNALHDHRLWPPFVTHLPRN
MEGVQVVADRQPLNPANIEARHHGVSDVPRLGAMDADEPLFVDDYRATDD
EWTLQKVFYLCLMPAMTNNRACGLGLNLKTLLVDLFYRPAFLLMPAPEDS
IAAQRQAVGEMLTELVEDVATDAHTPLLQACRELFLAVQFVGEHVKVLEV
RAPLDHAQRQGLPDFISRQHVLYNGCCVVTAPKTLIEYSLPVPFHRFYSN
PTICAALSDDIKRYVTEFPHYHRHDGGFPLPTAFAHEYHNWLRSPFSRYS
ATCPNVLHSVMTLAAMLYKISPVSLVLQTKAHIHPGFALTAVRTDTFEVD
MLLYSGKSCTSVIINNPIVTKEERDISTTYHVTQNINTVDMGLGYTSNTC
VAYVNRVRTDMGVRVQDLFRVFPMNVYRHDEVDRWIRHAAGVERPQLLDT
ETISMLTFGSMSERNAAATVHGQKAACELILTPVTMDVNYFKIPNNPRGR
ASCMLAVDPYDTEAATKAIYDHREADAQTFAATHNPWASQAGCLSDVLYN
TRHRERLGYNSKFYSPCAQYFNTEEIIAANKTLFKTIDEYLLRAKDCIRG
DTDTQYVCVEGTEQLIENPCRLTQEALPILSTTTLALMETKLKGGAGAFA
TSETHFGNYVVGEIIPLQQSMLFNS
3D structure
PDB7etj Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Chaina
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide a P755 F767 P679 F691
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid
GO:0039622 T=16 icosahedral viral capsid

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7etj, PDBe:7etj, PDBj:7etj
PDBsum7etj
PubMed34315863
UniProtA0A1U8QPG3

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