Structure of PDB 6wxf Chain a

Receptor sequence
>6wxfa (length=259) Species: 444185 (Simian rotavirus A strain RRV) [Search protein sequence]
LPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDTLSQLF
LTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDATLQLDMSELA
DLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIG
CLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGPRE
NVAVIQVGGSDVLDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQI
IQAMSKRSR
3D structure
PDB6wxf Functional refolding of the penetration protein on a non-enveloped virus.
Chaina
Resolution4.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA a D151 E154 E222 L224 D95 E98 E166 L168
BS02 CA a Q177 D228 D231 Q121 D172 D175
BS03 CA a G206 T214 E216 G150 T158 E160
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6wxf, PDBe:6wxf, PDBj:6wxf
PDBsum6wxf
PubMed33442061
UniProtP12476|VP7_ROTRH Outer capsid glycoprotein VP7

[Back to BioLiP]