Structure of PDB 6snt Chain a

Receptor sequence
>6snta (length=97) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
PKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVR
DLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPP
3D structure
PDB6snt RQT complex dissociates ribosomes collided on endogenous RQC substrate SDD1.
Chaina
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna a P2 K3 K4 R5 S7 N8 G9 R10 N11 K12 K13 R15 H17 K19 K32 K34 R38 K70 V75 S76 I79 H80 R82 V84 R85 R87 S88 R89 R92 R95 P1 K2 K3 R4 S6 N7 G8 R9 N10 K11 K12 R14 H16 K18 K31 K33 R37 K69 V74 S75 I78 H79 R81 V83 R84 R86 S87 R88 R91 R94
BS02 rna a N43 V50 H80 N42 V49 H79
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0000054 ribosomal subunit export from nucleus
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0042255 ribosome assembly
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6snt, PDBe:6snt, PDBj:6snt
PDBsum6snt
PubMed32203490
UniProtP39938|RS26A_YEAST Small ribosomal subunit protein eS26A (Gene Name=RPS26A)

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