Structure of PDB 6p5n Chain a

Receptor sequence
>6p5na (length=75) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
RDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQE
LLSKGLIKLVSKHRAQVIYTRNTKG
3D structure
PDB6p5n The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Chaina
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna a K43 L44 N46 R80 G81 S82 R85 K102 H103 R104 K3 L4 N6 R40 G41 S42 R45 K62 H63 R64
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006364 rRNA processing
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0014069 postsynaptic density
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0045202 synapse
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6p5n, PDBe:6p5n, PDBj:6p5n
PDBsum6p5n
PubMed31609474
UniProtG1TDB3|RS25_RABIT Small ribosomal subunit protein eS25 (Gene Name=RPS25)

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