Structure of PDB 8bhf Chain Z1

Receptor sequence
>8bhfZ1 (length=52) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKK
VK
3D structure
PDB8bhf Modulation of GluA2-gamma 5 synaptic complex desensitization, polyamine block and antiepileptic perampanel inhibition by auxiliary subunit cornichon-2.
ChainZ1
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna Z1 I69 R71 Y74 R76 H78 N83 R85 K86 K87 K88 G90 H91 N93 R96 K98 K99 I19 R21 Y24 R26 H28 N33 R35 K36 K37 K38 G40 H41 N43 R46 K48 K49
BS02 ZN Z1 C70 C73 C84 C89 C20 C23 C34 C39
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sun Dec 1 00:46:08 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8bhf', asym_id = 'Z1', title = 'Modulation of GluA2-gamma 5 synaptic complex des...nel inhibition by auxiliary subunit cornichon-2. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8bhf', asym_id='Z1', title='Modulation of GluA2-gamma 5 synaptic complex des...nel inhibition by auxiliary subunit cornichon-2. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003735,0005840,0006412', uniprot = '', pdbid = '8bhf', asym_id = 'Z1'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412', uniprot='', pdbid='8bhf', asym_id='Z1')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>