Structure of PDB 9bkd Chain Z

Receptor sequence
>9bkdZ (length=227) Species: 9606 (Homo sapiens) [Search protein sequence]
MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIII
LATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIA
QAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSM
KFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGP
KKPLPDHVSIVEPKDEILPTTPISEQK
3D structure
PDB9bkd Human tumor suppressor protein Pdcd4 binds at the mRNA entry channel in the 40S small ribosomal subunit.
ChainZ
Resolution2.6 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Z Q4 S6 K7 K8 R9 R27 R117 K141 R143 Q145 R146 A147 K151 L156 M157 H159 S160 G161 D162 H174 R178 Q179 V181 G183 K185 P205 D206 Q4 S6 K7 K8 R9 R27 R117 K141 R143 Q145 R146 A147 K151 L156 M157 H159 S160 G161 D162 H174 R178 Q179 V181 G183 K185 P205 D206
External links
PDB RCSB:9bkd, PDBe:9bkd, PDBj:9bkd
PDBsum9bkd
PubMed39117603
UniProtP23396|RS3_HUMAN Small ribosomal subunit protein uS3 (Gene Name=RPS3)

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