Structure of PDB 8rjd Chain Z

Receptor sequence
>8rjdZ (length=135) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPR
KVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVF
RDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF
3D structure
PDB8rjd UCSF ChimeraX: Meeting modern challenges in visualization and analysis.
ChainZ
Resolution2.78574 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Z A15 G16 R17 R36 Y38 R48 R51 T54 A55 G58 K59 K64 R65 K67 K69 K73 V74 N76 N78 H79 K107 R112 K115 K133 R135 F136 A14 G15 R16 R35 Y37 R47 R50 T53 A54 G57 K58 K63 R64 K66 K68 K72 V73 N75 N77 H78 K106 R111 K114 K132 R134 F135
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006364 rRNA processing
GO:0006412 translation
Cellular Component
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
GO:0005791 rough endoplasmic reticulum
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8rjd, PDBe:8rjd, PDBj:8rjd
PDBsum8rjd
PubMed38896445
UniProtG1TXF6|RL27_RABIT Large ribosomal subunit protein eL27 (Gene Name=RPL27)

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