Structure of PDB 7dz8 Chain Z

Receptor sequence

>7dz8Z (length=221) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence]

GIEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRY
RELELIHARWAMLGALGCITPELLAKSGTQFGEAVWFKAGAQIFSEGGLD
YLGNPSLVHAQNIVATLAVQVILMGLVEGYRVNGGPAGEGLDPLYPGESF
DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDD
HLSNPTVNNAFAFATKFTPSA

3D structure

PDB

7dz8 Structural basis of LhcbM5-mediated state transitions in green algae.

Chain

Resolution

3.16 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CHL	Z	A250 T251 F253	A214 T215 F217
BS02	CHL	Z	W48 W71 T73	W12 W35 T37
BS03	CHL	Z	K47 W48 L49 G50 P51 Y52 Y69 W71	K11 W12 L13 G14 P15 Y16 Y33 W35
BS04	CLA	Z	G67 D68 Y69 W71 D72 L76 Y86 R87 E90 R210 M213	G31 D32 Y33 W35 D36 L40 Y50 R51 E54 R174 M177
BS05	CLA	Z	Y86 L89 H93 F217 F220	Y50 L53 H57 F181 F184
BS06	CLA	Z	W96 L99 G103 T106 F117 Q128 Y137	W60 L63 G67 T70 F81 Q92 Y101
BS07	CHL	Z	L143 V144 H145 A146 T152	L107 V108 H109 A110 T116
BS08	CHL	Z	W96 T152 Q156	W60 T116 Q120
BS09	CHL	Z	F123 K124 G126 A127 Q156 F220	F87 K88 G90 A91 Q120 F184
BS10	CHL	Z	R95 W96 V163 Y166 R167 G171 P172 A173 G174 P182 F186	R59 W60 V127 Y130 R131 G135 P136 A137 G138 P146 F150
BS11	CHL	Z	L89 I92 H93 W96 Q156 M160 G161 E164 R167 F220	L53 I56 H57 W60 Q120 M124 G125 E128 R131 F184
BS12	CLA	Z	R95 M98 L99 Y181 P182 G183 F186 D187 L191 F198 L201 K202 K204 E205	R59 M62 L63 Y145 P146 G147 F150 D151 L155 F162 L165 K166 K168 E169
BS13	CLA	Z	K204 K207 N208 L211	K168 K171 N172 L175
BS14	CLA	Z	L102 L201 K204 N208 L211	L66 L165 K168 N172 L175
BS15	CLA	Z	F214 G218 Q222 V225 T226 N233 H237 N244 N245 A246 F249	F178 G182 Q186 V189 T190 N197 H201 N208 N209 A210 F213
BS16	CLA	Z	H237 L238 P241 F247	H201 L202 P205 F211

Gene Ontology

	Molecular Function
GO:0016168	chlorophyll binding

	Biological Process
GO:0009416	response to light stimulus
GO:0009765	photosynthesis, light harvesting
GO:0009768	photosynthesis, light harvesting in photosystem I
GO:0015979	photosynthesis

	Cellular Component
GO:0009507	chloroplast
GO:0009522	photosystem I
GO:0009523	photosystem II
GO:0009535	chloroplast thylakoid membrane
GO:0009579	thylakoid
GO:0016020	membrane

View graph for
Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:7dz8, PDBe:7dz8, PDBj:7dz8
PDBsum	7dz8
PubMed	34239095
UniProt	Q93WL4

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