Structure of PDB 6yst Chain Z

Receptor sequence
>6ystZ (length=58) Species: 562 (Escherichia coli) [Search protein sequence]
AKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAV
SFMVKVEE
3D structure
PDB6yst Mechanism of ribosome rescue by alternative ribosome-rescue factor B.
ChainZ
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Z S11 I13 P17 K18 A21 T22 L24 R29 I31 R37 E38 A42 G45 M46 S11 I13 P17 K18 A21 T22 L24 R29 I31 R37 E38 A42 G45 M46
BS02 rna Z L16 F52 L16 F52
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6yst, PDBe:6yst, PDBj:6yst
PDBsum6yst
PubMed32796827
UniProtP0AG51|RL30_ECOLI Large ribosomal subunit protein uL30 (Gene Name=rpmD)

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