Structure of PDB 6vwn Chain Z

Receptor sequence
>6vwnZ (length=48) Species: 562 (Escherichia coli) [Search protein sequence]
IREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEA
3D structure
PDB6vwn mRNA stem-loops can pause the ribosome by hindering A-site tRNA binding.
ChainZ
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Z I4 R5 K7 F19 Y20 T21 T22 K24 N25 K29 L35 K36 K37 F38 R43 H45 I1 R2 K4 F16 Y17 T18 T19 K21 N22 K26 L32 K33 K34 F35 R40 H42
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0046677 response to antibiotic
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6vwn, PDBe:6vwn, PDBj:6vwn
PDBsum6vwn
PubMed32427100
UniProtP0A7N9|RL33_ECOLI Large ribosomal subunit protein bL33 (Gene Name=rpmG)

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