Structure of PDB 6swe Chain Z

Receptor sequence
>6sweZ (length=197) Species: 272844 (Pyrococcus abyssi GE5) [Search protein sequence]
AIERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANP
GYVIGRGGRRIRELTRILERQFGLENPQIDVQEIKNPYLNAKVQAVRIAQ
ALERGIHFRRAAYAAMRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYL
AKVGNPAETLVSKGYAQALLKLGVIGVKVAIMPPDARLPDEIEIIEK
3D structure
PDB6swe Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation.
ChainZ
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Z K135 E139 R140 A141 Y150 K153 V154 N156 P157 Y166 L170 L173 V175 K134 E138 R139 A140 Y149 K152 V153 N155 P156 Y165 L169 L172 V174
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6swe, PDBe:6swe, PDBj:6swe
PDBsum6swe
PubMed32029867
UniProtQ9V1U1|RS3_PYRAB Small ribosomal subunit protein uS3 (Gene Name=rps3)

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