Structure of PDB 6ppf Chain Z

Receptor sequence
>6ppfZ (length=58) Species: 1423 (Bacillus subtilis) [Search protein sequence]
AKLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINKVS
HLVSVKEQ
3D structure
PDB6ppf Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate.
ChainZ
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Z R10 S11 I13 P16 E17 R20 T22 R24 T25 K29 K30 T31 A42 G45 M46 K49 R9 S10 I12 P15 E16 R19 T21 R23 T24 K28 K29 T30 A41 G44 M45 K48
BS02 rna Z Q19 H52 Q18 H51
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6ppf, PDBe:6ppf, PDBj:6ppf
PDBsum6ppf
PubMed31665744
UniProtP19947|RL30_BACSU Large ribosomal subunit protein uL30 (Gene Name=rpmD)

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