Structure of PDB 6nah Chain Z

Receptor sequence
>6nahZ (length=172) Species: 487 (Neisseria meningitidis) [Search protein sequence]
DIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFFYINSPG
GSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNS
RIMIHQPLISGGQASDIEIHARELLKIKEKLNRLMAKHCDRDLADLERDT
DRDNFMSAEEAKEYGLIDQILE
3D structure
PDB6nah ClpP protease activation results from the reorganization of the electrostatic interaction networks at the entrance pores.
ChainZ
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.92: endopeptidase Clp.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide Z E31 I33 F65 Y67 F117 L119 L196 E9 I11 F43 Y45 F95 L97 L171
BS02 peptide Z T84 F87 T62 F65
BS03 OCA Z L28 Y67 L6 Y45
Gene Ontology
Molecular Function
GO:0004176 ATP-dependent peptidase activity
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
GO:0051117 ATPase binding
Biological Process
GO:0006508 proteolysis
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins
Cellular Component
GO:0005737 cytoplasm
GO:0009368 endopeptidase Clp complex

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External links
PDB RCSB:6nah, PDBe:6nah, PDBj:6nah
PDBsum6nah
PubMed31925204
UniProtQ9JZ38|CLPP_NEIMB ATP-dependent Clp protease proteolytic subunit (Gene Name=clpP)

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