Structure of PDB 6j6q Chain Z

Receptor sequence
>6j6qZ (length=447) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
DEDIKFQRENWEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRNIIC
KNVVDFTLNKQNGRLIPALSALIALLNSDIPDIGETLAKELMLMFVQQFN
RKDYVSCGNILQCLSILFLYDVIHEIVILQILLLLLEKNSLRLVIAVMKI
CGWKLALVSKKTHDMIWEKLRYILQTQELSSTLRESLETLFEIRQKDYKS
GSQGLFILDPTSYTVHTHSYIVSDEDEANKELGNFEKCENQIYDMTSTND
VEFKKKIYLVLKSSLSGDEAAHKLLKLKIANNLKKSVVDIIIKSSLQEST
FSKFYSILSERMITFHRSWQTAYNETFEQNYTQDIEDYETDQLRILGKFW
GHLISYEFLPMDCLKIIKLTEEESCPQGRIFIKFLFQELVNELGLDELQL
RLNSSKLDGMFPLEGDAEHIRYSINFFTAIGLGLLTEDMRSRLTIIQ
3D structure
PDB6j6q Structures of the Catalytically Activated Yeast Spliceosome Reveal the Mechanism of Branching.
ChainZ
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide Z H310 L313 R349 F353 H272 L275 R311 F315
BS02 rna Z F353 H354 F315 H316
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0003723 RNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005684 U2-type spliceosomal complex
GO:0005737 cytoplasm
GO:0071013 catalytic step 2 spliceosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6j6q, PDBe:6j6q, PDBj:6j6q
PDBsum6j6q
PubMed30879786
UniProtP53333|CWC22_YEAST Pre-mRNA-splicing factor CWC22 (Gene Name=CWC22)

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