Structure of PDB 5wfk Chain Z

Receptor sequence
>5wfkZ (length=56) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
KTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVS
FMVKVE
3D structure
PDB5wfk Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A.
ChainZ
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Z S11 I13 P17 K18 T22 G25 G27 R29 R30 I31 R37 A42 G45 M46 S10 I12 P16 K17 T21 G24 G26 R28 R29 I30 R36 A41 G44 M45
BS02 rna Z H19 F52 H18 F51
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5wfk, PDBe:5wfk, PDBj:5wfk
PDBsum5wfk
PubMed29733411
UniProtP0AG51|RL30_ECOLI Large ribosomal subunit protein uL30 (Gene Name=rpmD)

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