Structure of PDB 5lzd Chain Z

Receptor sequence
>5lzdZ (length=58) Species: 562 (Escherichia coli) [Search protein sequence]
AKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAV
SFMVKVEE
3D structure
PDB5lzd The pathway to GTPase activation of elongation factor SelB on the ribosome.
ChainZ
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Z R10 S11 I13 G14 L16 P17 T22 L24 G25 G27 R29 R30 I31 R37 A42 G45 M46 R10 S11 I13 G14 L16 P17 T22 L24 G25 G27 R29 R30 I31 R37 A42 G45 M46
BS02 rna Z H19 F52 H19 F52
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5lzd, PDBe:5lzd, PDBj:5lzd
PDBsum5lzd
PubMed27842381
UniProtP0AG51|RL30_ECOLI Large ribosomal subunit protein uL30 (Gene Name=rpmD)

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