Structure of PDB 5l6c Chain Z

Receptor sequence
>5l6cZ (length=222) Species: 10090,559292 [Search protein sequence]
QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNI
VMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYSR
RFFPYYVYNIIAGLDEDGKGAVYSFDPVGSYQREQCRAGGAAASLIMPFL
DNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGD
GLEILIVTKDGVRKEFYELKRD
3D structure
PDB5l6c A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
ChainZ
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.4.25.1: proteasome endopeptidase complex.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG Z T192 V198 T192 V198
Gene Ontology
Biological Process
GO:0051603 proteolysis involved in protein catabolic process
Cellular Component
GO:0005839 proteasome core complex

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5l6c, PDBe:5l6c, PDBj:5l6c
PDBsum5l6c
PubMed27789522
UniProtO09061|PSB1_MOUSE Proteasome subunit beta type-1 (Gene Name=Psmb1);
P23724|PSB6_YEAST Proteasome subunit beta type-6 (Gene Name=PRE7)

[Back to BioLiP]