Structure of PDB 3cme Chain Z

Receptor sequence
>3cmeZ (length=73) Species: 2238 (Haloarcula marismortui) [Search protein sequence]
SSGRFGARYGRVSRRRVAEIESEMNEDHACPNCGEDRVDRQGTGIWQCSY
CDYKFTGGSYKPETPGGKTVRRS
3D structure
PDB3cme Peptidyl-CCA deacylation on the ribosome promoted by induced fit and the O3'-hydroxyl group of A76 of the unacylated A-site tRNA.
ChainZ
Resolution2.95 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna Z S34 G36 R37 G39 A40 R41 Y42 G43 R44 V45 R47 R70 R73 G75 T76 Y83 S1 G3 R4 G6 A7 R8 Y9 G10 R11 V12 R14 R37 R40 G42 T43 Y50
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
GO:0019843 rRNA binding
GO:0046872 metal ion binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3cme, PDBe:3cme, PDBj:3cme
PDBsum3cme
PubMed18818369
UniProtP60619|RL37A_HALMA Large ribosomal subunit protein eL43 (Gene Name=rpl37ae)

[Back to BioLiP]