Structure of PDB 5y6p Chain Y9

Receptor sequence

>5y6pY9 (length=245) Species: 35689 (Griffithsia pacifica) [Search protein sequence]

VLRTVLRSPVPSGAATVYGYVGRGNISVILAKADEYMAKSVRKQYLAKSN
PYGTFGVQCTEGSVKFAADFSRIRALNAEFRAKLGSASKKTFDMYENRKN
AISNSHGCHHEETQFVGYKGVSSMYNVSKSEASGSCSRYASPETVVEAAM
LRFMDIQVKMAANPTGVYNISCNEGAARGQAEDVRVAALNAAFRQGQKSL
GKLLDEKYQQKKQGYSFAHGCNYEEGLINKYPALGAAFRSKSYGY

3D structure

PDB

5y6p Structure of phycobilisome from the red alga Griffithsia pacifica

Chain

Resolution

3.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	PEB	Y9	Y76 S80 H150	Y36 S40 H110
BS02	PEB	Y9	L229 F233	L189 F193
BS03	PEB	Y9	F193 Q197 Y263	F153 Q157 Y223
BS04	PEB	Y9	Y85 C148 E151 F155 Y165	Y45 C108 E111 F115 Y125
BS05	PEB	Y9	M194 Q197 C261 E264 L274	M154 Q157 C221 E224 L234
BS06	PVN	Y9	Y85 Q98 E101 S170 E171 A172 C176 R178 Y283	Y45 Q58 E61 S130 E131 A132 C136 R138 Y243
BS07	PUB	Y9	K199 Y208 E214 R225 Y285	K159 Y168 E174 R185 Y245
BS08	PUB	Y9	L86 A108 D109 R112	L46 A68 D69 R72

External links

PDB	RCSB:5y6p, PDBe:5y6p, PDBj:5y6p
PDBsum	5y6p
PubMed	29045394

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