Structure of PDB 4lfz Chain Y7
Receptor sequence
>4lfzY7 (length=49) Species:
300852
(Thermus thermophilus HB8) [
Search protein sequence
]
MKRTWQPNRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPAVRKR
3D structure
PDB
4lfz
Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Chain
Y7
Resolution
3.92 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
Y7
M1 K2 R3 T4 W5 Q6 P7 N8 R9 R10 K11 R12 A13 H16 G17 F18 R19 R21 K29 K32 R33 R34 R35 Q36 K37 R39 W40 R41 R47 K48 R49
M1 K2 R3 T4 W5 Q6 P7 N8 R9 R10 K11 R12 A13 H16 G17 F18 R19 R21 K29 K32 R33 R34 R35 Q36 K37 R39 W40 R41 R47 K48 R49
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4lfz
,
PDBe:4lfz
,
PDBj:4lfz
PDBsum
4lfz
PubMed
25128388
UniProt
P80340
|RL34_THET8 Large ribosomal subunit protein bL34 (Gene Name=rpmH)
[
Back to BioLiP
]